创建一个books的数据库，并在其中建立一个名为book_message的表，包括书名、作者、出版社、出版时间和价格。编写一个应用程序，用预处理方式在该数据库中实现增加、删除和修改以及查询的基本功能。

首先，我们需要在MySQL中创建一个名为books的数据库，并在其中建立一个名为book_message的表，包括书名、作者、出版社、出版时间和价格。可以使用以下SQL语句：

CREATE DATABASE books;
USE books;

CREATE TABLE book_message (
  book_id INT(11) NOT NULL AUTO_INCREMENT,
  book_name VARCHAR(255) NOT NULL,
  author VARCHAR(255) NOT NULL,
  publisher VARCHAR(255) NOT NULL,
  publish_time DATE NOT NULL,
  price DECIMAL(10,2) NOT NULL,
  PRIMARY KEY (book_id)
);

接下来，我们可以编写一个使用预处理方式在该数据库中实现增加、删除和修改以及查询的基本功能的PHP应用程序。

<?php
// 连接数据库
$servername = "localhost";
$username = "username";
$password = "password";
$dbname = "books";

$conn = new mysqli($servername, $username, $password, $dbname);

// 检查连接是否成功
if ($conn->connect_error) {
  die("Connection failed: " . $conn->connect_error);
}

// 添加图书信息
if ($_SERVER["REQUEST_METHOD"] == "POST" && isset($_POST["add"])) {
  $book_name = $_POST["book_name"];
  $author = $_POST["author"];
  $publisher = $_POST["publisher"];
  $publish_time = $_POST["publish_time"];
  $price = $_POST["price"];

  $stmt = $conn->prepare("INSERT INTO book_message (book_name, author, publisher, publish_time, price) VALUES (?, ?, ?, ?, ?)");
  $stmt->bind_param("ssssd", $book_name, $author, $publisher, $publish_time, $price);
  $stmt->execute();

  header("Location: index.php");
}

// 删除图书信息
if ($_SERVER["REQUEST_METHOD"] == "POST" && isset($_POST["delete"])) {
  $book_id = $_POST["book_id"];

  $stmt = $conn->prepare("DELETE FROM book_message WHERE book_id = ?");
  $stmt->bind_param("i", $book_id);
  $stmt->execute();

  header("Location: index.php");
}

// 更新图书信息
if ($_SERVER["REQUEST_METHOD"] == "POST" && isset($_POST["update"])) {
  $book_id = $_POST["book_id"];
  $book_name = $_POST["book_name"];
  $author = $_POST["author"];
  $publisher = $_POST["publisher"];
  $publish_time = $_POST["publish_time"];
  $price = $_POST["price"];

  $stmt = $conn->prepare("UPDATE book_message SET book_name = ?, author = ?, publisher = ?, publish_time = ?, price = ? WHERE book_id = ?");
  $stmt->bind_param("ssssdi", $book_name, $author, $publisher, $publish_time, $price, $book_id);
  $stmt->execute();

  header("Location: index.php");
}

// 查询图书信息
$sql = "SELECT * FROM book_message";
$result = $conn->query($sql);

if ($result->num_rows > 0) {
  while($row = $result->fetch_assoc()) {
    echo "书名：" . $row["book_name"] . "，作者：" . $row["author"] . "，出版社：" . $row["publisher"] . "，出版时间：" . $row["publish_time"] . "，价格：" . $row["price"] . "<br>";
  }
} else {
  echo "0 结果";
}

$conn->close();
?>

该应用程序包括添加、删除和修改图书信息的表单以及查询结果的输出。可以在HTML中添加以下代码：

<!-- 添加图书信息 -->
<form method="post" action="<?php echo htmlspecialchars($_SERVER["PHP_SELF"]);?>">
  <input type="text" name="book_name" placeholder="书名" required>
  <input type="text" name="author" placeholder="作者" required>
  <input type="text" name="publisher" placeholder="出版社" required>
  <input type="date" name="publish_time" placeholder="出版时间" required>
  <input type="number" name="price" placeholder="价格" step="0.01" min="0" required>
  <input type="submit" name="add" value="添加">
</form>

<!-- 删除图书信息 -->
<form method="post" action="<?php echo htmlspecialchars($_SERVER["PHP_SELF"]);?>">
  <input type="number" name="book_id" placeholder="图书ID" required>
  <input type="submit" name="delete" value="删除">
</form>

<!-- 更新图书信息 -->
<form method="post" action="<?php echo htmlspecialchars($_SERVER["PHP_SELF"]);?>">
  <input type="number" name="book_id" placeholder="图书ID" required>
  <input type="text" name="book_name" placeholder="书名" required>
  <input type="text" name="author" placeholder="作者" required>
  <input type="text" name="publisher" placeholder="出版社" required>
  <input type="date" name="publish_time" placeholder="出版时间" required>
  <input type="number" name="price" placeholder="价格" step="0.01" min="0" required>
  <input type="submit" name="update" value="更新">
</form>

最后，我们可以在HTML中添加以下代码来输出查询结果：

<!-- 显示图书信息 -->
<?php
if ($_SERVER["REQUEST_METHOD"] == "GET" || ($_SERVER["REQUEST_METHOD"] == "POST" && isset($_POST["search"]))) {
?>
<form method="post" action="<?php echo htmlspecialchars($_SERVER["PHP_SELF"]);?>">
  <input type="text" name="keyword" placeholder="关键词">
  <input type="submit" name="search" value="搜索">
</form>
<?php
  if ($_SERVER["REQUEST_METHOD"] == "POST" && isset($_POST["search"])) {
    $keyword = $_POST["keyword"];
    $sql = "SELECT * FROM book_message WHERE book_name LIKE '%" . $keyword . "%' OR author LIKE '%" . $keyword . "%' OR publisher LIKE '%" . $keyword . "%'";
    $result = $conn->query($sql);

    if ($result->num_rows > 0) {
      while($row = $result->fetch_assoc()) {
        echo "书名：" . $row["book_name"] . "，作者：" . $row["author"] . "，出版社：" . $row["publisher"] . "，出版时间：" . $row["publish_time"] . "，价格：" . $row["price"] . "<br>";
      }
    } else {
      echo "0 结果";
    }
  }
}
?>

现在，我们就可以使用该应用程序在MySQL中实现增加、删除和修改以及查询图书信息的基本功能了。