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MODIS Reprojection Tool
User’s Manual
Release 4.0
February 2008
Land Processes DAAC
USGS Earth Resources Observation and Science (EROS) Center
in collaboration with the
Department of Mathematics and Computer Science
South Dakota School of Mines and Technology
MRT_Users_Manual.doc Page 1 8/26/2009

Table of Contents
Table of Contents ............................................................................. 2
Introduction ...................................................................................... 4
MODIS Reprojection Tool Capabilities ........................................... 5
MODIS Data Products .............................................................................. 5
Map Projections ......................................................................................... 5
ISIN-Enhanced GCTP ............................................................................... 5
Spectral subsetting ..................................................................................... 5
Spatial subsetting ....................................................................................... 5
Resampling ................................................................................................. 6
ISIN Shift .................................................................................................... 6
Datum Conversions .................................................................................... 6
Data Types .................................................................................................. 7
File Formats ................................................................................................ 7
Corner Coordinates ................................................................................... 7
3-Dimensional and 4-Dimensional Data Products .................................. 7
Format Conversion .................................................................................... 8
Mosaic Tool ................................................................................................. 8
Platforms ..................................................................................................... 8
Interfaces ..................................................................................................... 9
MODIS Reprojection Tool Installation .......................................... 10
Automatic Installation ............................................................................. 11
Automatic Installation Instructions for Unix Platforms ........................................................................ 12
Automatic Installation Instructions for Windows Platforms ................................................................ 13
Manual Installation .................................................................................. 14
Manual Installation Instructions for Windows Systems ....................................................................... 15
Adding a Shortcut Icon in Windows ...................................................... 16
Building the MRT .................................................................................... 17
Parameter Files ............................................................................... 20
Log File ............................................................................................ 21
Datum Conversions ........................................................................ 21
Handling Input and Output Datums ...................................................................................................... 21
Datum Conversions .............................................................................................................................. 22
Bounding Tiles................................................................................ 23
Metadata .......................................................................................... 26
MODIS Reprojection Tool Command-Line Interface ................... 27
Command-Line Options .......................................................................... 28
MODIS Mosaic Tool Command-Line Interface ............................. 31
MODIS Reprojection Tool GUI ....................................................... 33
Resampling ............................................................................................... 33
MRT_Users_Manual.doc Page 2 8/26/2009

Format Conversion .................................................................................. 43
Mosaic Tool ............................................................................................... 44
Setting Default Directories ...................................................................... 45
Credits ............................................................................................. 49
Contacts .......................................................................................... 49
Appendix A: MRT Parameter File Format ..................................... 50
File naming conventions .......................................................................... 50
Parameter file format .............................................................................. 50
Editing parameter files ............................................................................ 52
Appendix B: MRT Raw Binary File Format ................................... 53
File naming conventions .......................................................................... 53
Header file format .................................................................................... 54
Notes .......................................................................................................... 54
Editing header files .................................................................................. 55
Appendix C: Projection Parameters ............................................. 56
Appendix D: Overview of the MODIS Reprojection Tool
Resampling Process ...................................................................... 60
MRT_Users_Manual.doc Page 3 8/26/2009

Introduction
The Terra Moderate Resolution Imaging Spectroradiometer (MODIS) was launched into
space as part of NASA’s Earth Observing System platform in December 1999. In
addition, Aqua MODIS was launched in May 2002. The objective of MODIS is to
provide a comprehensive series of global observations of the Earth’s land, oceans, and
atmosphere in the visible and infrared regions of the spectrum.
1
These observations are
critical for studies of climate, vegetation, pollution, global climate change, and many
other important economic and environmental issues.
The MODIS Reprojection Tool (MRT) was originally developed to support the first post-
launch MODIS products (version 001 and 003) which were projected to the Integerized
Sinusoidal (ISIN) mapping grid and stored in HDF-EOS (Hierarchical Data Format –
Earth Observing System).
2
Current version 004 and 005 MODIS data are released in the
Sinusoidal (SIN) projection and retain the HDF-EOS file format. The MRT supports all
MODIS versions and projections.
The MODIS Reprojection Tool is software designed to help individuals work with
MODIS data by reprojecting MODIS images (Level-2G, Level-3, and Level-4 land data
products) into more standard map projections. If desired, the user may reproject only
selected portions of the image (spatial subsetting) and only selected image bands (spectral
subsetting). The software outputs MODIS data in file formats that are supported by
existing software packages (raw binary and GeoTIFF) as well as HDF-EOS. The MODIS
Reprojection Tool runs on several platforms, including Sun Solaris workstations, SGI
IRIX workstations, Linux, 64-bit Linux, Microsoft Windows, and Mac OS X. The look
and feel of the software is retained across the different platforms.
The heart of the MODIS Reprojection Tool is the resampler and mrtmosaic, executable
programs that may be run either from the command-line or from the MRT Graphical User
Interface (GUI). The GUI is an easy, user-friendly way to run the MODIS Reprojection
Tool. However, individuals with intensive data processing requirements are advised to
investigate the more powerful command-line interface, which allows background
processing of large MODIS data files when the system load is light. This User’s Manual
describes how to run the resampler and mrtmosaic both from the command-line and from
the GUI.
1
More information about MODIS may be obtained on the Web at http://modis.gsfc.nasa.gov/.
2
More information about HDF and HDF-EOS may be obtained on the Web at http://hdf.ncsa.uiuc.edu and
http://hdfeos.gsfc.nasa.gov
, respectively.
MRT_Users_Manual.doc Page 4 8/26/2009

MODIS Reprojection Tool Capabilities
MODIS Data Products
The MODIS Reprojection Tool currently allows the user to reproject all gridded
(Level-2G, Level-3, Level-4) MODIS Land data products. Support for swath (Level-1
and Level-2) data products is available in the MRTSwath application.
Map Projections
The MODIS Reprojection Tool allows the user to reproject to and from the following
map projections:
• Albers Equal Area
• Equirectangular
• Geographic
• Hammer
• Integerized Sinusoidal
• Interrupted Goode Homolosine
• Lambert Azimuthal
• Lambert Conformal Conic
• Mercator
• Molleweide
• Polar Stereographic
• Sinusoidal
• Transverse Mercator
• Universal Transverse Mercator
ISIN-Enhanced GCTP
As part of this software, the Generalized Cartographic Transformation Package (GCTP)
was modified to incorporate the Integerized Sinusoidal Projection.
Spectral subsetting
Any subset of the input bands may be selected for reprojection. The default is to reproject
all input bands. (Note: the term “band” is used interchangeably with the HDF-EOS term
“Scientific Data Set” or “SDS” throughout this document.)
Spatial subsetting
Two corners (upper left and lower right) of a rectangle in input/output space may be
specified. These corners may be given as coordinates in input latitude and longitude,
input line/sample pairs, or output projection coordinates. If specifying line/sample pairs
specify as (start line, start sample) and (end line, end sample), using a zero-based
coordinate system where the upper left corner is (0, 0). When specifying input lat/long or
input line/sample, the other two rectangle corners (upper right and lower left) are
computed automatically in input space. Then all four corners are reprojected into output
space, using the specified map projection and datum. Finally, a minimum-bounding
rectangle is computed that contains the four reprojected points, in output space. All points
MRT_Users_Manual.doc Page 5 8/26/2009
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