请提供使用python实现基于传算法工具箱GEAPT进行遗传算法优化OneClassSVM分类器参数的示例代码

时间: 2023-06-06 16:08:12 浏览: 62
以下是使用Python实现基于遗传算法工具箱GEAPT进行OneClassSVM分类器参数优化的示例代码: ``` import numpy as np from sklearn import svm from sklearn.datasets import make_classification from sklearn.model_selection import train_test_split from geatpy import algorithms, cror, paraselect, pson, tools # 定义OneClassSVM分类器目标函数 def svmTarget(M, X, y): gamma = M[0, 0] nu = M[0, 1] clf = svm.OneClassSVM(nu=nu, kernel='rbf', gamma=gamma) clf.fit(X) pred = clf.predict(X) return np.sum((y * pred == -1).astype(int)) # 获取数据集 X, y = make_classification(n_features=10, n_classes=2, n_samples=100) X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2) # 离散化参数空间 x1 = [i/100 for i in range(1, 101)] x2 = [i/100 for i in range(1, 101)] ranges = np.vstack([np.array(x1), np.array(x2)]) borders = np.array([0, 0]) # 遗传算法优化 Population = pson.crtfld(ranges, [1, 1]) Chrom = Population.Encoding Pf = Population.decs2phen(ranges) E0 = Population.Phen ObjV = tools.get_fitness(svmTarget, Chrom, Pf, [X_train, y_train]) best_idx = np.argmin(ObjV, axis=0) best_chrom = Chrom[best_idx][0, :] for gen in range(100): SelCh= paraselect.roulette_wheel_selection(ObjV) SelCh = cror.crossover(SelCh, Pc=0.9) SelCh = cror.mutbin(SelCh, pm=0.1) ObjVSel= tools.get_fitness(svmTarget, SelCh, Pf, [X_train, y_train]) Chrom = np.vstack([Chrom, SelCh]) ObjV = np.vstack([ObjV, ObjVSel]) Population.Chrom = Chrom dec = Population.phen2decs(Pf) # 非支配排序 NDSet, CrowdDis = tools.ndominfast(ObjV, 'max') if NDSet.shape[0] > len(borders) and gen < 99: # 淘汰劣解 borders, ratio = tools.delrep(NDSet, dec, borders, thresholds=0.6, ratio=0.5) if ratio < 0.5: # 计算适应度 signs = tools.get_signs(ObjV) FitnV = tools.ranking(signs * ObjV, 'max') FitnV = np.squeeze(FitnV) # 生成新种群 SelCh = tools.roulette_wheel_selection(NI=size_pop, FitnV=FitnV) SelCh = operators.seluniform(Chrom, pools=SelCh, size=size_pop) # 更新种群 Chrom = np.vstack([prePop.Chrom, SelCh]) Pf = prePop.evalsols(Chrom, ranges) Population.Chrom = Chrom Population.Phen = Population.decs2phen(ranges) if gen < 99: # 轮廓系数选择 SelCh = tools.selroul(CrowdDis, NDSet.shape[0], CrowdDis.shape[0], ObjV=ObjV, FitnV=ObjV) SelCh = operators.seluniform(Chrom, pools=SelCh, size=size_pop) Chrom = SelCh.copy() dec = Population.phen2decs(Pf) best_idx = np.argmin(ObjV, axis=0) best_chrom = Chrom[best_idx][0, :] gen += 1 # 测试集上评估 clf = svm.OneClassSVM(nu=best_chrom[1], kernel='rbf', gamma=best_chrom[0]) clf.fit(X_train) pred = clf.predict(X_test) accuracy = np.sum(pred == y_test)/len(y_test) print('测试集上的精度为:', accuracy) ```

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解析如下代码:from sklearn.svm import OneClassSVM from sklearn.model_selection import train_test_split import numpy as np from deap import creator, base, tools, algorithms # 生成随机数据作为样本 X = np.random.rand(100, 5) # 创建OneClassSVM分类器 clf = OneClassSVM() # 定义优化目标,这里使用评估分类器的准确率 creator.create("FitnessMax", base.Fitness, weights=(1.0,)) creator.create("Individual", list, fitness=creator.FitnessMax) # 定义一些算法参数 POPULATION_SIZE = 10 P_CROSSOVER = 0.9 P_MUTATION = 0.1 MAX_GENERATIONS = 50 HALL_OF_FAME_SIZE = 3 N_PARAMETER = 4 MIN_PARAM = 0.01 MAX_PARAM = 10.0 # 定义适应度评价函数,使用交叉验证计算准确率 def evaluate(individual): clf.set_params(kernel='rbf', gamma=individual[0], nu=individual[1]) accuracy = 0 for i in range(5): X_train, X_test = train_test_split(X, test_size=0.3) clf.fit(X_train) accuracy += clf.score(X_test) return accuracy / 5, # 定义遗传算法工具箱 toolbox = base.Toolbox() toolbox.register("attr_float", lambda: np.random.uniform(MIN_PARAM, MAX_PARAM)) toolbox.register("individual", tools.initRepeat, creator.Individual, toolbox.attr_float, n=N_PARAMETER) toolbox.register("population", tools.initRepeat, list, toolbox.individual) toolbox.register("evaluate", evaluate) toolbox.register("mate", tools.cxBlend, alpha=0.5) toolbox.register("mutate", tools.mutGaussian, mu=0, sigma=1, indpb=0.1) toolbox.register("select", tools.selTournament, tournsize=3) # 定义精英机制 hall_of_fame = tools.HallOfFame(HALL_OF_FAME_SIZE) # 运行遗传算法 population = toolbox.population(n=POPULATION_SIZE) stats = tools.Statistics(lambda ind: ind.fitness.values) stats.register("avg", np.mean) stats.register("min", np.min) stats.register("max", np.max) population, logbook = algorithms.eaSimple(population, toolbox, cxpb=P_CROSSOVER, mutpb=P_MUTATION, ngen=MAX_GENERATIONS, stats=stats, halloffame=hall_of_fame) # 输出优化结果 best_individual = tools.selBest(population, k=1)[0] best_parameters = [] for param in best_individual: best_parameters.append(round(param, 2)) print("OneClassSVM params: gamma={}, nu={}".format(*best_parameters))

为什么这段python代码用不了?它报错的是AttributeError: 'OneClassSVM' object has no attribute 'score' 错误代码为population, logbook = algorithms.eaSimple(population, toolbox, cxpb=P_CROSSOVER, mutpb=P_MUTATION, ngen=MAX_GENERATIONS, stats=stats, halloffame=hall_of_fame)完整代码如下:from sklearn.svm import OneClassSVM from sklearn.model_selection import train_test_split import numpy as np from deap import creator, base, tools, algorithms # 生成随机数据作为样本 X = np.random.rand(100, 5) # 创建OneClassSVM分类器 clf = OneClassSVM() # 定义优化目标,这里使用评估分类器的准确率 creator.create("FitnessMax", base.Fitness, weights=(1.0,)) creator.create("Individual", list, fitness=creator.FitnessMax) # 定义一些算法参数 POPULATION_SIZE = 10 P_CROSSOVER = 0.9 P_MUTATION = 0.1 MAX_GENERATIONS = 50 HALL_OF_FAME_SIZE = 3 N_PARAMETER = 4 MIN_PARAM = 0.01 MAX_PARAM = 10.0 # 定义适应度评价函数,使用交叉验证计算准确率 def evaluate(individual): clf.set_params(kernel='rbf', gamma=individual[0], nu=individual[1]) accuracy = 0 for i in range(5): X_train, X_test = train_test_split(X, test_size=0.3) clf.fit(X_train) accuracy += clf.score(X_test) return accuracy / 5, # 定义遗传算法工具箱 toolbox = base.Toolbox() toolbox.register("attr_float", lambda: np.random.uniform(MIN_PARAM, MAX_PARAM)) toolbox.register("individual", tools.initRepeat, creator.Individual, toolbox.attr_float, n=N_PARAMETER) toolbox.register("population", tools.initRepeat, list, toolbox.individual) toolbox.register("evaluate", evaluate) toolbox.register("mate", tools.cxBlend, alpha=0.5) toolbox.register("mutate", tools.mutGaussian, mu=0, sigma=1, indpb=0.1) toolbox.register("select", tools.selTournament, tournsize=3) # 定义精英机制 hall_of_fame = tools.HallOfFame(HALL_OF_FAME_SIZE) # 运行遗传算法 population = toolbox.population(n=POPULATION_SIZE) stats = tools.Statistics(lambda ind: ind.fitness.values) stats.register("avg", np.mean) stats.register("min", np.min) stats.register("max", np.max) population, logbook = algorithms.eaSimple(population, toolbox, cxpb=P_CROSSOVER, mutpb=P_MUTATION, ngen=MAX_GENERATIONS, stats=stats, halloffame=hall_of_fame) # 输出优化结果 best_individual = tools.selBest(population, k=1)[0] best_parameters = [] for param in best_individual: best_parameters.append(round(param, 2)) print("OneClassSVM params: gamma={}, nu={}".format(*best_parameters))

如何在下面的代码中给nv值限制在nu <= 0 or nu > 1:from sklearn.svm import OneClassSVM from sklearn.model_selection import train_test_split import numpy as np from deap import creator, base, tools, algorithms # 创建OneClassSVM分类器 clf = OneClassSVM() # 定义优化目标,这里使用评估分类器的准确率 creator.create("FitnessMax", base.Fitness, weights=(1.0,)) creator.create("Individual", list, fitness=creator.FitnessMax) # 定义一些算法参数 POPULATION_SIZE = 10 P_CROSSOVER = 0.9 P_MUTATION = 0.1 MAX_GENERATIONS = 50 HALL_OF_FAME_SIZE = 3 N_PARAMETER = 4 MIN_PARAM = 0.01 MAX_PARAM = 10.0 # 定义适应度评价函数,使用交叉验证计算准确率 def evaluate(individual): clf.set_params(kernel='rbf', gamma=individual[0], nu=individual[1]) accuracy = 0 for i in range(5): X_train, X_test = train_test_split(X_TRAIN, test_size=0.2) clf.fit(X_train) accuracy += clf.score(X_test) return accuracy / 5, # 定义遗传算法工具箱 toolbox = base.Toolbox() toolbox.register("attr_float", lambda: np.random.uniform(MIN_PARAM, MAX_PARAM)) toolbox.register("individual", tools.initRepeat, creator.Individual, toolbox.attr_float, n=N_PARAMETER) toolbox.register("population", tools.initRepeat, list, toolbox.individual) toolbox.register("evaluate", evaluate) toolbox.register("mate", tools.cxBlend, alpha=0.5) toolbox.register("mutate", tools.mutGaussian, mu=0, sigma=1, indpb=0.1) toolbox.register("select", tools.selTournament, tournsize=3) # 定义精英机制 hall_of_fame = tools.HallOfFame(HALL_OF_FAME_SIZE) # 运行遗传算法 population = toolbox.population(n=POPULATION_SIZE) stats = tools.Statistics(lambda ind: ind.fitness.values) stats.register("avg", np.mean) stats.register("min", np.min) stats.register("max", np.max) population, logbook = algorithms.eaSimple(population, toolbox, cxpb=P_CROSSOVER, mutpb=P_MUTATION, ngen=MAX_GENERATIONS, stats=stats, halloffame=hall_of_fame) # 输出优化结果 best_individual = tools.selBest(population, k=1)[0] best_parameters = [] for param in best_individual: best_parameters.append(round(param, 2)) print("OneClassSVM params: gamma={}, nu={}".format(*best_parameters))

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