如何使用R语言画逻辑回归的立方样条
时间: 2024-09-11 16:09:46 浏览: 69
要使用R语言画逻辑回归的立方样条图,你可以按照以下步骤操作:
1. **加载必要的库**[^1]:
```r
library(lrm) # 对于逻辑回归模型
library(ggplot2) # 用于绘图
```
2. **创建或加载数据集**。这里假设你有一个名为"data"的数据框,其中包含了用于逻辑回归分析的变量(如'death', 'age', 和'sex')。
3. **拟合逻辑回归模型**:
```r
fit3 <- lrm(death ~ rcs(age,4) + sex, data = data)
```
`rcs()` 函数创建了一个交互式的分段多项式回归,`age` 是自变量,`4` 表示将年龄分成四段进行拟合。
4. **预测结果**:
```r
OR <- Predict(fit3, age, fun = exp, ref.zero = TRUE)
```
`Predict()` 函数对'age'变量进行了预测,并应用了逻辑函数 (`exp`),`ref.zero = TRUE` 意味着结果会以死亡率为基点(即零参照水平)给出。
5. **绘制立方样条图**:
```r
ggplot(OR) +
geom_line(aes(x = age, y = fitted.values)) # 绘制逻辑回归曲线
```
这里我们使用 `geom_line()` 来显示预测的概率作为年龄的函数。
完整代码示例:
```r
library(lrm)
library(ggplot2)
# 假设data已经存在...
fit3 <- lrm(death ~ rcs(age,4) + sex, data = data)
OR <- Predict(fit3, age, fun = exp, ref.zero = TRUE)
ggplot(OR) +
geom_line(aes(x = age, y = fitted.values))
```
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