from sklearn.model_selection import StratifiedKFold kfold = StratifiedKFold(n_splits=5, shuffle=True, random_state=42) for train, test in kfold.split(X, y): model = create_model() model.fit(X[train], y[train], validation_data=(X[test], y[test]), epochs=10, batch_size=32)这段代码中的训练集与测试集可以为3:7开吗?

时间: 2024-03-07 20:51:25 浏览: 22
可以的。在这段代码中,使用StratifiedKFold函数进行了5折交叉验证,每次将数据集分成训练集和测试集。数据集的划分比例取决于你传入的参数。在这里,数据集被随机shuffle过,因此训练集和测试集的比例可能不是完全相同的。你可以根据具体情况调整参数,比如把n_splits设置为1,这样就只会有一组划分,你可以将其划分成3:7的训练集和测试集。
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import pandas as pd import numpy as np from sklearn.model_selection import StratifiedKFold, KFold from sklearn.svm import SVR train = pd.read_csv('train.csv') test = pd.read_csv('test.csv') # 分离数据集 X_train_c = train.drop(['ID', 'CLASS'], axis=1).values y_train_c = train['CLASS'].values X_test_c = test.drop(['ID'], axis=1).values nfold = 5 kf = KFold(n_splits=nfold, shuffle=True, random_state=2020) prediction1 = np.zeros((len(X_test_c),)) i = 0 for train_index, valid_index in kf.split(X_train_c, y_train_c): print("\nFold {}".format(i + 1)) X_train, label_train = X_train_c[train_index], y_train_c[train_index] X_valid, label_valid = X_train_c[valid_index], y_train_c[valid_index] clf = SVR(kernel='rbf', C=1, gamma='scale') clf.fit(X_train, label_train) x1 = clf.predict(X_valid) y1 = clf.predict(X_test_c) prediction1 += y1 / nfold i += 1 result1 = np.round(prediction1) id_ = range(210, 314) df = pd.DataFrame({'ID': id_, 'CLASS': result1}) df.to_csv("baseline.csv", index=False)

这段代码是一个基线模型,使用了支持向量回归(SVR)算法,通过 K 折交叉验证来训练模型,并对测试集进行预测。其中,训练数据集和测试数据集均为 CSV 格式的文件,需要使用 pandas 库读取。具体的实现过程如下: 1. 读取训练集和测试集的数据,并进行预处理。 ```python train = pd.read_csv('train.csv') test = pd.read_csv('test.csv') X_train_c = train.drop(['ID', 'CLASS'], axis=1).values y_train_c = train['CLASS'].values X_test_c = test.drop(['ID'], axis=1).values ``` 2. 定义 K 折交叉验证器,并进行模型训练和预测。 ```python nfold = 5 kf = KFold(n_splits=nfold, shuffle=True, random_state=2020) prediction1 = np.zeros((len(X_test_c),)) i = 0 for train_index, valid_index in kf.split(X_train_c, y_train_c): print("\nFold {}".format(i + 1)) X_train, label_train = X_train_c[train_index], y_train_c[train_index] X_valid, label_valid = X_train_c[valid_index], y_train_c[valid_index] clf = SVR(kernel='rbf', C=1, gamma='scale') clf.fit(X_train, label_train) x1 = clf.predict(X_valid) y1 = clf.predict(X_test_c) prediction1 += y1 / nfold i += 1 ``` 3. 对测试集的预测结果进行处理,并将结果保存到 CSV 文件中。 ```python result1 = np.round(prediction1) id_ = range(210, 314) df = pd.DataFrame({'ID': id_, 'CLASS': result1}) df.to_csv("baseline.csv", index=False) ``` 其中,`prediction1` 是对测试集的预测结果进行累加的数组,`result1` 是将累加结果四舍五入后得到的最终预测结果。最后将结果保存到 CSV 文件中,方便后续的提交。

逐行解释下面的代码:from sklearn.datasets import load_breast_cancer from sklearn.model_selection import train_test_split, GridSearchCV, KFold from sklearn.ensemble import RandomForestClassifier data = load_breast_cancer() X_train, X_test, y_train, y_test = train_test_split(data.data, data.target, test_size=0.3, random_state=42) kf = KFold(n_splits=5, shuffle=True, random_state=42) param_grid = {'n_estimators': range(1, 21, 1), 'max_depth': range(5, 16)} rf = RandomForestClassifier(random_state=42) grid_search = GridSearchCV(rf, param_grid=param_grid, cv=kf, n_jobs=-1) grid_search.fit(X_train, y_train) best_rf = RandomForestClassifier(n_estimators=grid_search.best_params_['n_estimators'], max_depth=grid_search.best_params_['max_depth'], random_state=42) best_rf.fit(X_train, y_train) y_pred = best_rf.predict(X_test)

这段代码的作用是使用随机森林算法对乳腺癌数据集进行分类,并找到最佳的模型参数。 首先,代码从sklearn.datasets库中导入了load_breast_cancer函数和从sklearn.model_selection库中导入了train_test_split、GridSearchCV和KFold函数以及从sklearn.ensemble库中导入了RandomForestClassifier类。 然后,代码调用load_breast_cancer()函数来加载乳腺癌数据集。接着,使用train_test_split函数将数据集分成训练集和测试集。其中,test_size参数指定测试集所占比例为30%,random_state参数用于设置随机数种子,以确保每次运行代码时得到的结果相同。 随后,使用KFold函数将训练集分成5个折叠,shuffle参数设为True表示在拆分之前对数据进行随机重排,random_state参数用于设置随机数种子。 接下来,定义一个字典param_grid,其中包含了随机森林算法的两个参数:n_estimators和max_depth。n_estimators参数表示随机森林中决策树的数量,max_depth参数表示每个决策树的最大深度。param_grid的取值范围分别为1到20和5到15。 然后,创建一个RandomForestClassifier类的实例rf,将其作为参数传递给GridSearchCV函数,用于在给定的参数空间中搜索最佳的参数组合。cv参数指定使用的交叉验证策略,n_jobs参数指定使用的CPU数量。 接着,调用fit方法来训练模型并搜索最佳参数组合,将结果存储在grid_search对象中。 接下来,创建一个新的RandomForestClassifier类的实例best_rf,使用grid_search.best_params_字典中的最佳参数组合来初始化该实例,并将其用于训练数据。最后,使用best_rf.predict方法对测试数据进行预测,将结果存储在y_pred变量中。

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#导入所需库 import numpy as np import pandas as pd from sklearn.preprocessing import LabelEncoder from keras.utils import to_categorical from keras.models import Sequential from keras.layers import Dense from sklearn.model_selection import KFold #读入数据 train_data = pd.read_csv('ProSeqs_Train.txt', delimiter=' ', header=None) test_data = pd.read_csv('ProSeqs_Test.txt', delimiter=' ', header=None) #预处理训练集数据 X = train_data.iloc[:, 2:].values y = train_data.iloc[:, 1].values le = LabelEncoder() y = le.fit_transform(y) y = to_categorical(y) #定义模型 model = Sequential() model.add(Dense(64, input_dim=X.shape[1], activation='relu')) model.add(Dense(32, activation='relu')) model.add(Dense(2, activation='softmax')) model.compile(loss='categorical_crossentropy', optimizer='adam', metrics=['accuracy']) #K折交叉验证训练模型 kf = KFold(n_splits=5, shuffle=True, random_state=42) fold_scores = [] for train_index, valid_index in kf.split(X): train_X, train_y = X[train_index], y[train_index] valid_X, valid_y = X[valid_index], y[valid_index] model.fit(train_X, train_y, validation_data=(valid_X, valid_y), epochs=50, batch_size=32, verbose=2) fold_scores.append(model.evaluate(valid_X, valid_y, verbose=0)[1]) print('KFold cross-validation accuracy: {:.2f}%'.format(np.mean(fold_scores) * 100)) #预处理测试集数据 test_X = test_data.iloc[:, 1:].values #预测测试集结果 preds = model.predict(test_X) preds = np.argmax(preds, axis=1) #保存预测结果至文件中 np.savetxt('preds.txt', preds, fmt='%d') #输出预测结果 print('Predictions:') print(preds)该蛋白质功能预测实验涉及分类模型的理论基础

优化这段代码 for j in n_components: estimator = PCA(n_components=j,random_state=42) pca_X_train = estimator.fit_transform(X_standard) pca_X_test = estimator.transform(X_standard_test) cvx = StratifiedKFold(n_splits=5, shuffle=True, random_state=42) cost = [-5, -3, -1, 1, 3, 5, 7, 9, 11, 13, 15] gam = [3, 1, -1, -3, -5, -7, -9, -11, -13, -15] parameters =[{'kernel': ['rbf'], 'C': [2x for x in cost],'gamma':[2x for x in gam]}] svc_grid_search=GridSearchCV(estimator=SVC(random_state=42), param_grid=parameters,cv=cvx,scoring=scoring,verbose=0) svc_grid_search.fit(pca_X_train, train_y) param_grid = {'penalty':['l1', 'l2'], "C":[0.00001,0.0001,0.001, 0.01, 0.1, 1, 10, 100, 1000], "solver":["newton-cg", "lbfgs","liblinear","sag","saga"] # "algorithm":['auto', 'ball_tree', 'kd_tree', 'brute'] } LR_grid = LogisticRegression(max_iter=1000, random_state=42) LR_grid_search = GridSearchCV(LR_grid, param_grid=param_grid, cv=cvx ,scoring=scoring,n_jobs=10,verbose=0) LR_grid_search.fit(pca_X_train, train_y) estimators = [ ('lr', LR_grid_search.best_estimator_), ('svc', svc_grid_search.best_estimator_), ] clf = StackingClassifier(estimators=estimators, final_estimator=LinearSVC(C=5, random_state=42),n_jobs=10,verbose=0) clf.fit(pca_X_train, train_y) estimators = [ ('lr', LR_grid_search.best_estimator_), ('svc', svc_grid_search.best_estimator_), ] param_grid = {'final_estimator':[LogisticRegression(C=0.00001),LogisticRegression(C=0.0001), LogisticRegression(C=0.001),LogisticRegression(C=0.01), LogisticRegression(C=0.1),LogisticRegression(C=1), LogisticRegression(C=10),LogisticRegression(C=100), LogisticRegression(C=1000)]} Stacking_grid =StackingClassifier(estimators=estimators,) Stacking_grid_search = GridSearchCV(Stacking_grid, param_grid=param_grid, cv=cvx, scoring=scoring,n_jobs=10,verbose=0) Stacking_grid_search.fit(pca_X_train, train_y) var = Stacking_grid_search.best_estimator_ train_pre_y = cross_val_predict(Stacking_grid_search.best_estimator_, pca_X_train,train_y, cv=cvx) train_res1=get_measures_gridloo(train_y,train_pre_y) test_pre_y = Stacking_grid_search.predict(pca_X_test) test_res1=get_measures_gridloo(test_y,test_pre_y) best_pca_train_aucs.append(train_res1.loc[:,"AUC"]) best_pca_test_aucs.append(test_res1.loc[:,"AUC"]) best_pca_train_scores.append(train_res1) best_pca_test_scores.append(test_res1) train_aucs.append(np.max(best_pca_train_aucs)) test_aucs.append(best_pca_test_aucs[np.argmax(best_pca_train_aucs)].item()) train_scores.append(best_pca_train_scores[np.argmax(best_pca_train_aucs)]) test_scores.append(best_pca_test_scores[np.argmax(best_pca_train_aucs)]) pca_comp.append(n_components[np.argmax(best_pca_train_aucs)]) print("n_components:") print(n_components[np.argmax(best_pca_train_aucs)])

目标编码 def gen_target_encoding_feats(train, train_2, test, encode_cols, target_col, n_fold=10): '''生成target encoding特征''' # for training set - cv tg_feats = np.zeros((train.shape[0], len(encode_cols))) kfold = StratifiedKFold(n_splits=n_fold, random_state=1024, shuffle=True) for _, (train_index, val_index) in enumerate(kfold.split(train[encode_cols], train[target_col])): df_train, df_val = train.iloc[train_index], train.iloc[val_index] for idx, col in enumerate(encode_cols): # get all possible values for the current column col_values = set(train[col].unique()) if None in col_values: col_values.remove(None) # replace value with mode if it does not appear in the training set mode = train[col].mode()[0] df_val.loc[~df_val[col].isin(col_values), f'{col}_mean_target'] = mode test.loc[~test[col].isin(col_values), f'{col}_mean_target'] = mode target_mean_dict = df_train.groupby(col)[target_col].mean() if df_val[f'{col}_mean_target'].empty: df_val[f'{col}_mean_target'] = df_val[col].map(target_mean_dict) tg_feats[val_index, idx] = df_val[f'{col}_mean_target'].values for idx, encode_col in enumerate(encode_cols): train[f'{encode_col}_mean_target'] = tg_feats[:, idx] # for train_2 set - cv tg_feats = np.zeros((train_2.shape[0], len(encode_cols))) kfold = StratifiedKFold(n_splits=n_fold, random_state=1024, shuffle=True) for _, (train_index, val_index) in enumerate(kfold.split(train_2[encode_cols], train_2[target_col])): df_train, df_val = train_2.iloc[train_index], train_2.iloc[val_index] for idx, col in enumerate(encode_cols): target_mean_dict = df_train.groupby(col)[target_col].mean() if df_val[f'{col}_mean_target'].insull.any(): df_val[f'{col}_mean_target'] = df_val[col].map(target_mean_dict) tg_feats[val_index, idx] = df_val[f'{col}_mean_target'].values for idx, encode_col in enumerate(encode_cols): train_2[f'{encode_col}_mean_target'] = tg_feats[:, idx] # for testing set for col in encode_cols: target_mean_dict = train.groupby(col)[target_col].mean() test[f'{col}_mean_target'] = test[col].map(target_mean_dict) return train, train_2, test features = ['house_exist', 'debt_loan_ratio', 'industry', 'title'] train_1, train_2, test = gen_target_encoding_feats(train_1, train_2, test, features, ['isDefault'], n_fold=10)检查错误和警告并修改

修改代码,使得输出结果是可重复的:# 定义模型参数 input_dim = X_train.shape[1] epochs = 100 batch_size = 32 learning_rate = 0.01 dropout_rate = 0.7 # 定义模型结构 def create_model(): model = Sequential() model.add(Dense(64, input_dim=input_dim, activation='relu')) model.add(Dropout(dropout_rate)) model.add(Dense(32, activation='relu')) model.add(Dropout(dropout_rate)) model.add(Dense(1, activation='sigmoid')) optimizer = Adam(learning_rate=learning_rate) model.compile(loss='binary_crossentropy', optimizer=optimizer, metrics=['accuracy']) return model # 5折交叉验证 kf = KFold(n_splits=5, shuffle=True, random_state=42) cv_scores = [] for train_index, test_index in kf.split(X_train): # 划分训练集和验证集 X_train_fold, X_val_fold = X_train.iloc[train_index], X_train.iloc[test_index] y_train_fold, y_val_fold = y_train_forced_turnover_nolimited.iloc[train_index], y_train_forced_turnover_nolimited.iloc[test_index] # 创建模型 model = create_model() # 定义早停策略 #early_stopping = EarlyStopping(monitor='val_loss', patience=10, verbose=1) # 训练模型 model.fit(X_train_fold, y_train_fold, validation_data=(X_val_fold, y_val_fold), epochs=epochs, batch_size=batch_size,verbose=1) # 预测验证集 y_pred = model.predict(X_val_fold) # 计算AUC指标 auc = roc_auc_score(y_val_fold, y_pred) cv_scores.append(auc) # 输出交叉验证结果 print('CV AUC:', np.mean(cv_scores)) # 在全量数据上重新训练模型 model = create_model() model.fit(X_train, y_train_forced_turnover_nolimited, epochs=epochs, batch_size=batch_size, verbose=1) #测试集结果 test_pred = model.predict(X_test) test_auc = roc_auc_score(y_test_forced_turnover_nolimited, test_pred) test_f1_score = f1_score(y_test_forced_turnover_nolimited, np.round(test_pred)) test_accuracy = accuracy_score(y_test_forced_turnover_nolimited, np.round(test_pred)) print('Test AUC:', test_auc) print('Test F1 Score:', test_f1_score) print('Test Accuracy:', test_accuracy) #训练集结果 train_pred = model.predict(X_train) train_auc = roc_auc_score(y_train_forced_turnover_nolimited, train_pred) train_f1_score = f1_score(y_train_forced_turnover_nolimited, np.round(train_pred)) train_accuracy = accuracy_score(y_train_forced_turnover_nolimited, np.round(train_pred)) print('Train AUC:', train_auc) print('Train F1 Score:', train_f1_score) print('Train Accuracy:', train_accuracy)

纠正代码:trainsets = pd.read_csv('/Users/zhangxinyu/Desktop/trainsets82.csv') testsets = pd.read_csv('/Users/zhangxinyu/Desktop/testsets82.csv') y_train_forced_turnover_nolimited = trainsets['m3_forced_turnover_nolimited'] X_train = trainsets.drop(['m3_P_perf_ind_all_1','m3_P_perf_ind_all_2','m3_P_perf_ind_all_3','m3_P_perf_ind_allind_1',\ 'm3_P_perf_ind_allind_2','m3_P_perf_ind_allind_3','m3_P_perf_ind_year_1','m3_P_perf_ind_year_2',\ 'm3_P_perf_ind_year_3','m3_forced_turnover_nolimited','m3_forced_turnover_3mon',\ 'm3_forced_turnover_6mon','m3_forced_turnover_1year','m3_forced_turnover_3year',\ 'm3_forced_turnover_5year','m3_forced_turnover_10year',\ 'CEOid','CEO_turnover_N','year','Firmid','appo_year'],axis=1) y_test_forced_turnover_nolimited = testsets['m3_forced_turnover_nolimited'] X_test = testsets.drop(['m3_P_perf_ind_all_1','m3_P_perf_ind_all_2','m3_P_perf_ind_all_3','m3_P_perf_ind_allind_1',\ 'm3_P_perf_ind_allind_2','m3_P_perf_ind_allind_3','m3_P_perf_ind_year_1','m3_P_perf_ind_year_2',\ 'm3_P_perf_ind_year_3','m3_forced_turnover_nolimited','m3_forced_turnover_3mon',\ 'm3_forced_turnover_6mon','m3_forced_turnover_1year','m3_forced_turnover_3year',\ 'm3_forced_turnover_5year','m3_forced_turnover_10year',\ 'CEOid','CEO_turnover_N','year','Firmid','appo_year'],axis=1) # 定义模型参数 input_dim = X.shape[1] epochs = 100 batch_size = 32 lr = 0.001 dropout_rate = 0.5 # 定义模型结构 def create_model(): model = Sequential() model.add(Dense(64, input_dim=input_dim, activation='relu')) model.add(Dropout(dropout_rate)) model.add(Dense(32, activation='relu')) model.add(Dropout(dropout_rate)) model.add(Dense(1, activation='sigmoid')) optimizer = Adam(lr=lr) model.compile(loss='binary_crossentropy', optimizer=optimizer, metrics=['accuracy']) return model # 5折交叉验证 kf = KFold(n_splits=5, shuffle=True, random_state=42) cv_scores = [] for train_index, test_index in kf.split(X): # 划分训练集和验证集 X_train, X_val = X[train_index], X[test_index] y_train, y_val = y[train_index], y[test_index] # 创建模型 model = create_model() # 定义早停策略 early_stopping = EarlyStopping(monitor='val_loss', patience=10, verbose=1) # 训练模型 model.fit(X_train, y_train, validation_data=(X_val, y_val), epochs=epochs, batch_size=batch_size, callbacks=[early_stopping], verbose=1) # 预测验证集 y_pred = model.predict(X_val) # 计算AUC指标 auc = roc_auc_score(y_val, y_pred) cv_scores.append(auc) # 输出交叉验证结果 print('CV AUC:', np.mean(cv_scores)) # 在全量数据上重新训练模型 model = create_model() model.fit(X, y, epochs=epochs, batch_size=batch_size, verbose=1)

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