基于mpi4py和multiprocess的并行遗传算法用于解决旅行商问题的python代码

以下是基于mpi4py和multiprocess的并行遗传算法用于解决旅行商问题的Python代码：

import random
import numpy as np
from mpi4py import MPI
from multiprocessing import Pool

comm = MPI.COMM_WORLD
rank = comm.Get_rank()
size = comm.Get_size()

cities = np.array([[0, 0], [0, 1], [0, 2], [0, 3], [1, 0], [1, 1], [1, 2], [1, 3], [2, 0], [2, 1], [2, 2], [2, 3], [3, 0], [3, 1], [3, 2], [3, 3]])
num_cities = len(cities)
population_size = 100
elite_size = 20
mutation_rate = 0.01
generations = 500

def distance(city1, city2):
    x_distance = abs(city1[0] - city2[0])
    y_distance = abs(city1[1] - city2[1])
    distance = np.sqrt((x_distance ** 2) + (y_distance ** 2))
    return distance

def fitness(route):
    route_distance = 0
    for i in range(num_cities):
        from_city = route[i]
        to_city = None
        if i + 1 < num_cities:
            to_city = route[i + 1]
        else:
            to_city = route[0]
        route_distance += distance(cities[from_city], cities[to_city])
    return route_distance

def create_route():
    route = random.sample(range(num_cities), num_cities)
    return route

def create_population():
    population = []
    for i in range(population_size):
        population.append(create_route())
    return population

def rank_routes(population):
    fitness_results = {}
    for i in range(len(population)):
        fitness_results[i] = fitness(population[i])
    return sorted(fitness_results.items(), key = lambda x : x[1])

def select(population_ranked):
    selection_results = []
    df = np.array(population_ranked)
    df[:, 1] = 1 / df[:, 1].astype(np.float32)
    df[:, 1] = df[:, 1] / df[:, 1].sum()
    for i in range(elite_size):
        selection_results.append(population_ranked[i][0])
    for i in range(len(population_ranked) - elite_size):
        pick = np.random.choice(len(population_ranked), 1, p = df[:, 1])[0]
        selection_results.append(population_ranked[pick][0])
    return selection_results

def breed(parent1, parent2):
    child = [None] * num_cities
    gene_a = int(random.random() * num_cities)
    gene_b = int(random.random() * num_cities)
    start_gene = min(gene_a, gene_b)
    end_gene = max(gene_a, gene_b)
    for i in range(start_gene, end_gene):
        child[i] = parent1[i]
    for i in range(num_cities):
        if parent2[i] not in child:
            for j in range(num_cities):
                if child[j] is None:
                    child[j] = parent2[i]
                    break
    return child

def breed_population(mating_pool):
    children = []
    pool = Pool(processes = (size - 1))
    for i in range(0, len(mating_pool), 2):
        child1, child2 = pool.apply_async(breed, (mating_pool[i], mating_pool[i + 1])).get()
        children.append(child1)
        children.append(child2)
    pool.close()
    return children

def mutate(individual):
    for swapped in range(num_cities):
        if random.random() < mutation_rate:
            swap_with = int(random.random() * num_cities)
            city1 = individual[swapped]
            city2 = individual[swap_with]
            individual[swapped] = city2
            individual[swap_with] = city1
    return individual

def mutate_population(population):
    mutated_population = []
    pool = Pool(processes = (size - 1))
    for individual in population:
        mutated_individual = pool.apply_async(mutate, (individual,)).get()
        mutated_population.append(mutated_individual)
    pool.close()
    return mutated_population

def next_generation(current_generation):
    population_ranked = rank_routes(current_generation)
    mating_pool = select(population_ranked)
    children = breed_population(mating_pool)
    next_generation = mutate_population(children)
    return next_generation

if rank == 0:
    population = create_population()
else:
    population = None

for i in range(generations):
    if i % (generations // 10) == 0:
        if rank == 0:
            print("Generation:", i)
            print("Best route:", rank_routes(population)[0][1])
        comm.barrier()
    if rank == 0:
        population_split = np.array_split(population, size - 1)
    else:
        population_split = None
    population_split = comm.scatter(population_split, root = 0)
    new_population_split = next_generation(population_split)
    new_population = comm.gather(new_population_split, root = 0)
    if rank == 0:
        population = [item for sublist in new_population for item in sublist]

if rank == 0:
    print("Generation:", generations)
    print("Best route:", rank_routes(population)[0][1])

该代码使用了MPI和multiprocess库，其中MPI用于实现并行化，而multiprocess用于实现并行化中的并发操作。在代码中，首先定义了需要计算的城市坐标和其他一些参数，如种群大小、杂交率、精英数和迭代次数等。然后定义了一些辅助函数，如计算两个城市之间的距离、计算一条路径的适应度、创建一条随机路径、创建一个随机种群等。

在主程序中，进程0首先创建了初始种群，并将其分成多个子种群分配给所有进程。然后，每个进程都进行了遗传算法的迭代，由于每个进程都有自己的种群子集，因此每个进程都可以独立地执行并行化计算。在每个进程中，首先对种群进行排名，选择出最好的个体和其他个体，然后对其他个体进行交叉和变异，生成新的种群。最后，新的种群被收集回进程0，并更新种群。在迭代之后，进程0打印出最优路径和距离。