![](https://csdnimg.cn/release/download_crawler_static/55037933/bg4.jpg)
http://www.broadinstitute.org/scientific-community/science/programs/medic
al-and-population-genetics/haploview/haploview
Haploview can be cited with the following paper:
Barrett JC, Fry B, Maller J, Daly MJ. Haploview: analysis and visualizati
on of LD and haplotype maps. Bioinformatics. 2005 Jan 15 [PubMed ID: 1529
7300]
Information about the exact test for HW can be found in the following pap
er:
Wigginton JE, Cutler DJ, Abecasis GR. A note on exact tests of Hardy-Wein
berg equilibrium. Am J Hum Genet. 2005 May;76(5):887-93.
Information about parenTDT can be found in the following paper:
Purcell S, Sham P, Daly MJ. Parental phenotypes in family-based associati
on analysis. Am J Hum Genet. 2005 Feb;76(2):249-59.
1.Haploview: Visualization and analysis of SNP genotype data.
Barrett JC.
Cold Spring Harb Protoc. 2009 Oct;2009(10):pdb.ip71.
PMID: 20147036 [PubMed - indexed for MEDLINE]
Related citations
2.Haploview: analysis and visualization of LD and haplotype maps.
Barrett JC, Fry B, Maller J, Daly MJ.
Bioinformatics. 2005 Jan 15;21(2):263-5. Epub 2004 Aug 5.
bioinfotech 16:40:26 2011.2.25
Haploview: Visualization and analysis of SNP genotype data.
Barrett JC.
Cold Spring Harb Protoc. 2009 Oct;2009(10):pdb.ip71.
bioinfotech 16:51:20
http://cshprotocols.cshlp.org/cgi/content/abstract/2009/10/pdb.ip71
2008-01-23 01:13
我现在在 mayo clinic 做 postdoc ,主要做药物遗传学的。 对 SNP 和 Affymetrix 和 illumina 的 Chips
有些了解(我们实验室有几百万美元的 mRNA Chips ),鉴于这一领域内容比较新, 国内做的较少,
所以愿意跟大家探讨, 分享我的一些想法和体会。 title 有些夸大, 主要是为了吸引更多的人进来。
当然也可以给我的信箱留言: qinyx8088@gmail.com 。
HapMap 介绍
HapMap 是国际上针对人类基因组的又一重大合作项目 .