遗传算法的特征选择python
时间: 2023-06-28 11:08:21 浏览: 42
遗传算法是一种优化算法,可以用于特征选择。下面是一个简单的遗传算法特征选择的Python示例代码:
```python
import random
import numpy as np
from sklearn.datasets import make_classification
# 生成样本数据
X, y = make_classification(n_samples=100, n_features=10, n_informative=5, n_redundant=0, n_classes=2, random_state=42)
# 定义适应度函数(分类准确率)
def fitness_function(individual, X, y):
selected_features = X[:, individual]
accuracy = 0.0
# 使用交叉验证计算分类准确率
# ...
return accuracy
# 定义遗传算法参数
POPULATION_SIZE = 50
GENE_LENGTH = X.shape[1]
CROSSOVER_PROBABILITY = 0.8
MUTATION_PROBABILITY = 0.1
GENERATIONS = 50
# 初始化种群
population = np.random.randint(2, size=(POPULATION_SIZE, GENE_LENGTH))
# 开始遗传算法
for generation in range(GENERATIONS):
# 计算适应度
fitness = np.zeros(shape=(POPULATION_SIZE,))
for i in range(POPULATION_SIZE):
fitness[i] = fitness_function(population[i], X, y)
# 找到最佳个体
best_individual = population[np.argmax(fitness)]
best_fitness = np.max(fitness)
print("Generation {}: Best Fitness = {}".format(generation, best_fitness))
# 选择
selection_probabilities = fitness / np.sum(fitness)
selected_indices = np.random.choice(range(POPULATION_SIZE), size=POPULATION_SIZE, p=selection_probabilities)
selected_population = population[selected_indices]
# 交叉
for i in range(POPULATION_SIZE // 2):
parent1, parent2 = selected_population[i], selected_population[POPULATION_SIZE - i - 1]
if random.random() < CROSSOVER_PROBABILITY:
crossover_point = random.randint(1, GENE_LENGTH - 1)
offspring1 = np.concatenate((parent1[:crossover_point], parent2[crossover_point:]))
offspring2 = np.concatenate((parent2[:crossover_point], parent1[crossover_point:]))
selected_population[i], selected_population[POPULATION_SIZE - i - 1] = offspring1, offspring2
# 变异
for i in range(POPULATION_SIZE):
if random.random() < MUTATION_PROBABILITY:
mutation_point = random.randint(0, GENE_LENGTH - 1)
selected_population[i][mutation_point] = 1 - selected_population[i][mutation_point]
# 更新种群
population = selected_population
```
在这个例子中,我们使用适应度函数来评估每个个体的质量。适应度函数计算分类器在给定特征子集下的准确率。我们使用交叉验证来评估分类器的准确率。遗传算法的主要步骤包括选择、交叉和变异。在每一代中,我们选择两个个体,并使用交叉和变异操作来创建两个新的后代。最终,我们更新种群并重复这个过程,直到达到预定的迭代次数。
请注意,这个示例代码仅仅是一个简单的遗传算法特征选择的实现。在实际应用中,您可能需要调整算法参数、改进适应度函数、使用更高级的交叉和变异操作等,以达到更好的性能。