Cannot find 'seurat_clusters' in this Seurat object
时间: 2024-05-20 12:17:55 浏览: 85
As an AI language model, I do not have access to specific Seurat objects or data. However, in general, if you are unable to find 'seurat_clusters' in a Seurat object, it may be because the object was not properly generated or saved with a clustering step.
To generate clusters in Seurat, you can use the `FindClusters` function, which assigns cells to clusters based on their gene expression profiles. After clustering, the resulting cluster assignments are stored in a metadata slot within the Seurat object under the key 'seurat_clusters'.
If you did run the `FindClusters` function but still cannot find 'seurat_clusters', it may be due to a typo or misnaming of the metadata key. You can check the available metadata keys using the `MetaData` function and see if there is a different key name used for storing cluster assignments.
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