上述代码哪里有相似度和浓度?
时间: 2024-03-25 19:42:01 浏览: 18
非常抱歉,我写错了。上述代码在克隆操作中使用了相似度的概念,但是没有使用浓度的概念。以下是更正后的代码:
```python
import numpy as np
# 定义适应值函数
def fitness_func(population):
fitness = np.sum(population, axis=1)
return fitness
# 定义相似度函数
def similarity(population, threshold):
n = len(population)
sim = np.zeros((n, n))
for i in range(n):
for j in range(n):
sim[i, j] = np.sum(population[i] == population[j]) / len(population[i])
sim[sim < threshold] = 0
return sim
# 定义克隆操作
def clone(population, fitness, sim):
n = len(population)
clones = []
for i in range(n):
num_clones = int(fitness[i] * np.sum(sim[i]))
for j in range(num_clones):
clones.append(population[i])
return clones
# 定义变异操作
def mutate(clones, mutation_rate):
n = len(clones)
for i in range(n):
for j in range(len(clones[i])):
if np.random.rand() < mutation_rate:
clones[i][j] = 1 - clones[i][j]
return clones
# 定义选择操作
def select(population, fitness, concentration):
n = len(population)
num_selected = int(n * concentration)
idx = np.argsort(-fitness)[:num_selected]
return population[idx]
# 定义竞争操作
def compete(population, clones, fitness):
n = len(population)
m = len(clones)
total_pop = np.vstack((population, clones))
total_fitness = np.concatenate((fitness, fitness))
idx = np.argsort(-total_fitness)[:n]
return total_pop[idx], total_fitness[idx]
# 定义主函数
def immune_genetic_algorithm(population_size, num_features, sim_threshold, mutation_rate, concentration, num_generations):
# 初始化种群
population = np.random.randint(2, size=(population_size, num_features))
best_fitness = -np.inf
# 迭代进化
for i in range(num_generations):
# 计算适应值
fitness = fitness_func(population)
# 计算相似度
sim = similarity(population, sim_threshold)
# 克隆操作
clones = clone(population, fitness, sim)
# 变异操作
clones = mutate(clones, mutation_rate)
# 选择操作
new_population = select(population, fitness, concentration)
# 竞争操作
total_pop, total_fitness = compete(new_population, clones, fitness)
population = total_pop[:population_size]
fitness = total_fitness[:population_size]
# 更新最优解
best_idx = np.argmax(fitness)
if fitness[best_idx] > best_fitness:
best_fitness = fitness[best_idx]
best_solution = population[best_idx]
# 输出结果
print("Generation %d: Best fitness = %f" % (i+1, best_fitness))
return best_solution, best_fitness
```
在这段代码中,我们使用了两个新的函数:相似度函数和浓度参数。相似度函数计算了每对抗体之间的相似度,然后根据相似度和适应值来计算克隆数量。浓度参数用于控制竞争操作中适应值高的抗体与适应值低的抗体之间的比例。