def TestBiLSTM(bilstm, test_dataloader, max_speed): inputs, labels = next(iter(test_dataloader)) [batch_size, step_size, fea_size] = inputs.size() # bilstm.cuda() cur_time = time.time() pre_time = time.time() use_gpu = torch.cuda.is_available() bilstm.eval() for data in test_dataloader: inputs, labels = data if inputs.shape[0] != batch_size: continue if use_gpu: inputs, labels = Variable(inputs.cuda()), Variable(labels.cuda()) else: inputs, labels = Variable(inputs), Variable(labels) Hidden_State_f,Cell_State_f,Hidden_State_b,Cell_State_b= bilstm.initHidden(batch_size=40) outputs = bilstm.forward(inputs) print(outputs) return outputs如果要将这段代码的输出进行结果可视化,还需要哪些信息才能生成散点图
时间: 2023-06-20 14:09:51 浏览: 231
要将这段代码的输出进行结果可视化,还需要以下信息:
1. labels(真实值):可以将其作为散点图的y轴坐标。
2. outputs(预测值):可以将其作为散点图的x轴坐标。
3. max_speed(最大速度):可以用于设置散点图的x轴和y轴的范围。
根据以上信息,可以使用matplotlib库绘制散点图,代码示例如下:
```
import matplotlib.pyplot as plt
# 获取真实值和预测值
outputs = TestBiLSTM(bilstm, test_dataloader, max_speed)
_, pred = torch.max(outputs, 1)
labels = labels.cpu().numpy()
pred = pred.cpu().numpy()
# 绘制散点图
plt.scatter(pred, labels, s=10)
plt.xlim(0, max_speed)
plt.ylim(0, max_speed)
plt.xlabel('Predicted Speed')
plt.ylabel('True Speed')
plt.show()
```
相关问题
#定义一个get_fea类函数,返回类变量x0 def get_fea_x0(self): return self.fea_x0 def get_fea_x1(self): return self.fea_x1 def get_fea_x2(self): return self.fea_x2 def get_fea_x3(self): return self.fea_x3 卷积神经网络已建立,利用上述代码,在此基础上修改出pytorch框架下调用指定层的tsne 中文回答 2023/5/26 11:07:08
感谢您提供的更多上下文信息。要在PyTorch框架下调用指定层的TSNE,需要进行以下步骤:
1. 首先,您需要使用PyTorch构建卷积神经网络,并将其训练。在训练过程中,您需要将不同层的特征提取出来,并保存到一个列表中。
2. 接下来,您可以使用scikit-learn中的TSNE类来实现降维。您需要将保存的特征列表作为输入,调用fit_transform函数来获得降维后的特征表示。
3. 最后,您可以使用Matplotlib等库可视化降维后的特征表示。
下面是一个示例代码,您可以根据您的具体需求进行修改和调整:
```python
import torch
import numpy as np
from sklearn.manifold import TSNE
import matplotlib.pyplot as plt
# 定义卷积神经网络
class CNN(torch.nn.Module):
def __init__(self):
super(CNN, self).__init__()
self.conv1 = torch.nn.Conv2d(3, 32, 3, padding=1)
self.conv2 = torch.nn.Conv2d(32, 64, 3, padding=1)
self.conv3 = torch.nn.Conv2d(64, 128, 3, padding=1)
self.fc1 = torch.nn.Linear(128 * 8 * 8, 512)
self.fc2 = torch.nn.Linear(512, 10)
def forward(self, x):
x = torch.nn.functional.relu(self.conv1(x))
x = torch.nn.functional.max_pool2d(x, 2)
x = torch.nn.functional.relu(self.conv2(x))
x = torch.nn.functional.max_pool2d(x, 2)
x = torch.nn.functional.relu(self.conv3(x))
x = torch.nn.functional.max_pool2d(x, 2)
x = x.view(-1, 128 * 8 * 8)
x = torch.nn.functional.relu(self.fc1(x))
x = self.fc2(x)
return x
# 定义一个函数,用于获取指定层的特征
def get_feature_maps(model, x, layer_num):
feature_maps = []
for i in range(layer_num):
x = model[i](x)
feature_maps.append(x)
return feature_maps
# 加载数据集
train_loader = torch.utils.data.DataLoader(
torchvision.datasets.CIFAR10(
root='./data', train=True, download=True,
transform=torchvision.transforms.Compose([
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
(0.5, 0.5, 0.5), (0.5, 0.5, 0.5))
])),
batch_size=32, shuffle=True)
# 实例化卷积神经网络
model = CNN()
# 训练卷积神经网络
criterion = torch.nn.CrossEntropyLoss()
optimizer = torch.optim.SGD(model.parameters(), lr=0.001, momentum=0.9)
for epoch in range(10):
for i, (inputs, labels) in enumerate(train_loader):
optimizer.zero_grad()
outputs = model(inputs)
loss = criterion(outputs, labels)
loss.backward()
optimizer.step()
# 获取指定层的特征
layer_num = 3
inputs, labels = next(iter(train_loader))
feature_maps = get_feature_maps(model, inputs, layer_num)
# 转换特征为numpy数组
feature_maps_np = [fm.detach().numpy() for fm in feature_maps]
# 将特征转换为二维数组
feature_maps_np_2d = [fm.reshape(fm.shape[0], -1) for fm in feature_maps_np]
# 使用TSNE降维
tsne = TSNE(n_components=2, random_state=0)
feature_maps_tsne = [tsne.fit_transform(fm) for fm in feature_maps_np_2d]
# 可视化降维后的特征
for i in range(layer_num):
plt.figure()
plt.scatter(feature_maps_tsne[i][:, 0], feature_maps_tsne[i][:, 1], c=labels)
plt.title('Layer {}'.format(i+1))
plt.show()
```
这个示例代码演示了如何在PyTorch框架下调用指定层的TSNE,您可以根据您的具体需求进行修改和调整。
编写pytorch代码,定义LSTMAttention模型,定义一个FA_CPSO优化算法,用FA_CPSO算法有优化模型中神经元个数、dropout比率、batch_size、学习率等超参数,将优化好的超参数传递给模型,在特征训练集X_train.csv和标签训练集y_train.csv上训练模型,将最优的参数设置给模型,在特征测试集X_test.csv和标签测试集y_test.csv上测试模型,进一步优化模型,将优化后的参数设置给模型,并输出测试损失,绘制测试集的预测值和实际值,计算测试集的均方根误差,在预测集上进行预测,设定标签数据最大值的85%为警戒线,绘制预测集的实际值到达的时间和预测值到达的时间
好的,我了解了你的要求。首先,需要安装pytorch和pandas库。
以下是代码实现:
```python
import torch
import torch.nn as nn
import pandas as pd
import numpy as np
from scipy.stats import uniform
from sko.PSO import PSO
# 定义LSTMAttention模型
class LSTMAttention(nn.Module):
def __init__(self, input_size, hidden_size, output_size, num_layers, dropout):
super(LSTMAttention, self).__init__()
self.hidden_size = hidden_size
self.num_layers = num_layers
self.lstm = nn.LSTM(input_size, hidden_size, num_layers, batch_first=True, bidirectional=True)
self.dropout = nn.Dropout(dropout)
self.fc1 = nn.Linear(hidden_size * 2, output_size)
self.softmax = nn.Softmax(dim=1)
def forward(self, x):
h0 = torch.zeros(self.num_layers * 2, x.size(0), self.hidden_size).to(device)
c0 = torch.zeros(self.num_layers * 2, x.size(0), self.hidden_size).to(device)
out, _ = self.lstm(x, (h0, c0))
out = self.dropout(out)
out = self.fc1(out[:, -1, :])
out = self.softmax(out)
return out
# 加载数据
X_train = pd.read_csv('X_train.csv')
y_train = pd.read_csv('y_train.csv')
X_test = pd.read_csv('X_test.csv')
y_test = pd.read_csv('y_test.csv')
# 转换数据格式
X_train = torch.from_numpy(X_train.values).float()
y_train = torch.from_numpy(y_train.values).long().squeeze()
X_test = torch.from_numpy(X_test.values).float()
y_test = torch.from_numpy(y_test.values).long().squeeze()
# 定义超参数空间
dim = 4
lb = [16, 0.1, 64, 0.0001]
ub = [256, 0.5, 256, 0.1]
pso_bound = np.array([lb, ub])
# 定义FA_CPSO优化算法
class FA_CPSO(PSO):
def __init__(self, func, lb, ub, dimension, size_pop=50, max_iter=300, w=0.8, c1=2, c2=2, c3=2, p=0.5):
super().__init__(func, lb, ub, dimension, size_pop, max_iter, w, c1, c2, p)
self.c3 = c3 # FA_CPSO新增参数
self.S = np.zeros((self.size_pop, self.dimension)) # 储存每个个体的历代最优位置
self.F = np.zeros(self.size_pop) # 储存每个个体的当前适应度值
self.Fbest = np.zeros(self.max_iter + 1) # 储存每次迭代的最优适应度值
self.Fbest[0] = self.gbest_y
self.S = self.X.copy()
def evolve(self):
self.F = self.cal_fitness(self.X)
self.Fbest[self.gbest_iter] = self.gbest_y
for i in range(self.size_pop):
if uniform.rvs() < self.p:
# 个体位置更新
self.X[i] = self.S[i] + self.c3 * (self.gbest - self.X[i]) + self.c1 * \
(self.pbest[i] - self.X[i]) + self.c2 * (self.pbest[np.random.choice(self.neighbor[i])] - self.X[i])
else:
# 个体位置更新
self.X[i] = self.S[i] + self.c1 * (self.pbest[i] - self.X[i]) + self.c2 * (self.pbest[np.random.choice(self.neighbor[i])] - self.X[i])
# 边界处理
self.X[i] = np.clip(self.X[i], self.lb, self.ub)
# 适应度值更新
self.F[i] = self.func(self.X[i])
# 个体历代最优位置更新
if self.F[i] < self.func(self.S[i]):
self.S[i] = self.X[i]
# 全局最优位置更新
self.gbest = self.S[self.F.argmin()]
self.gbest_y = self.F.min()
# 定义优化目标函数
def objective_function(para):
hidden_size, dropout, batch_size, learning_rate = para
model = LSTMAttention(10, hidden_size, 2, 2, dropout).to(device)
criterion = nn.CrossEntropyLoss()
optimizer = torch.optim.Adam(model.parameters(), lr=learning_rate)
train_dataset = torch.utils.data.TensorDataset(X_train, y_train)
train_loader = torch.utils.data.DataLoader(train_dataset, batch_size=batch_size, shuffle=True)
for epoch in range(100):
for i, (inputs, labels) in enumerate(train_loader):
inputs = inputs.to(device)
labels = labels.to(device)
optimizer.zero_grad()
outputs = model(inputs)
loss = criterion(outputs, labels)
loss.backward()
optimizer.step()
test_dataset = torch.utils.data.TensorDataset(X_test, y_test)
test_loader = torch.utils.data.DataLoader(test_dataset, batch_size=len(test_dataset))
for inputs, labels in test_loader:
inputs = inputs.to(device)
labels = labels.to(device)
outputs = model(inputs)
pred = torch.argmax(outputs, dim=1)
test_loss = criterion(outputs, labels)
rmse = torch.sqrt(torch.mean((pred - labels) ** 2))
return test_loss.item() + rmse.item()
# 运行FA_CPSO算法进行超参数优化
device = torch.device('cuda' if torch.cuda.is_available() else 'cpu')
fa_cpso = FA_CPSO(objective_function, lb, ub, dim, size_pop=50, max_iter=100)
fa_cpso.run()
# 输出最优超参数
best_hidden_size, best_dropout, best_batch_size, best_learning_rate = fa_cpso.gbest
# 使用最优超参数训练模型
model = LSTMAttention(10, best_hidden_size, 2, 2, best_dropout).to(device)
criterion = nn.CrossEntropyLoss()
optimizer = torch.optim.Adam(model.parameters(), lr=best_learning_rate)
train_dataset = torch.utils.data.TensorDataset(X_train, y_train)
train_loader = torch.utils.data.DataLoader(train_dataset, batch_size=best_batch_size, shuffle=True)
for epoch in range(100):
for i, (inputs, labels) in enumerate(train_loader):
inputs = inputs.to(device)
labels = labels.to(device)
optimizer.zero_grad()
outputs = model(inputs)
loss = criterion(outputs, labels)
loss.backward()
optimizer.step()
# 在测试集上进行预测
test_dataset = torch.utils.data.TensorDataset(X_test, y_test)
test_loader = torch.utils.data.DataLoader(test_dataset, batch_size=len(test_dataset))
for inputs, labels in test_loader:
inputs = inputs.to(device)
labels = labels.to(device)
outputs = model(inputs)
pred = torch.argmax(outputs, dim=1)
test_loss = criterion(outputs, labels)
test_rmse = torch.sqrt(torch.mean((pred - labels) ** 2))
# 输出测试损失和测试集的均方根误差
print('Test loss: {:.4f}, Test RMSE: {:.4f}'.format(test_loss.item(), test_rmse.item()))
# 绘制测试集的预测值和实际值
import matplotlib.pyplot as plt
plt.plot(pred.cpu().numpy(), label='Predict')
plt.plot(labels.cpu().numpy(), label='Actual')
plt.legend()
plt.show()
# 在预测集上进行预测
X_pred = torch.from_numpy(pd.read_csv('X_pred.csv').values).float().to(device)
outputs = model(X_pred)
pred = torch.argmax(outputs, dim=1)
# 计算预测值到达警戒线的时间和实际值到达警戒线的时间
threshold = y_train.max() * 0.85
pred_time = np.argmax(pred.cpu().numpy() >= threshold)
actual_time = np.argmax(y_test.cpu().numpy() >= threshold)
# 绘制预测集的实际值到达的时间和预测值到达的时间
plt.axvline(x=pred_time, color='r', linestyle='--')
plt.axvline(x=actual_time, color='g', linestyle='--')
plt.plot(pred.cpu().numpy(), label='Predict')
plt.plot(y_test.cpu().numpy(), label='Actual')
plt.legend()
plt.show()
```
请注意,这只是一个代码示例,可能需要根据数据集的特点进行调整和修改。
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