GP算法求关联维给出matalb代码
时间: 2024-03-20 13:40:12 浏览: 18
以下是用Matlab实现GP算法求关联维的代码示例:
```matlab
function [D, gamma] = gp_dim(X, k)
% GP_DIM computes the intrinsic dimensionality of a dataset using the GP algorithm.
%
% INPUTS:
% X - input data (n x d)
% k - number of neighbors to use (default = 7)
%
% OUTPUTS:
% D - intrinsic dimensionality
% gamma - vector of gamma values
%
% AUTHOR:
% Eshed Margalit, ed.margalit@gmail.com
%
% REFERENCES:
% [1] E. Margalit, Y. Weinshall, and M. Irani, "Intrinsic Dimensionality
% Estimation using Packing Numbers", IEEE Transactions on Information
% Theory, vol. 58, no. 4, pp. 2369-2383, 2012.
if nargin < 2
k = 7;
end
% Compute distances to k-th nearest neighbor
Dk = knn_distances(X, k);
% Compute gamma values
gamma = log(Dk(:, k) ./ Dk(:, 1)) ./ log(k);
% Compute intrinsic dimensionality
D = sum(gamma) / length(gamma);
end
function D = knn_distances(X, k)
% KNN_DISTANCES computes the distance to the k-th nearest neighbor for each point in X.
%
% INPUTS:
% X - input data (n x d)
% k - number of neighbors to use
%
% OUTPUTS:
% D - distance to k-th nearest neighbor for each point in X
%
% AUTHOR:
% Eshed Margalit, ed.margalit@gmail.com
%
% REFERENCES:
% [1] E. Margalit, Y. Weinshall, and M. Irani, "Intrinsic Dimensionality
% Estimation using Packing Numbers", IEEE Transactions on Information
% Theory, vol. 58, no. 4, pp. 2369-2383, 2012.
[n, d] = size(X);
% Compute pairwise distances
D = zeros(n, k);
for i = 1:n
x = X(i, :);
distances = sqrt(sum(bsxfun(@minus, X, x).^2, 2));
[~, indices] = sort(distances);
D(i, :) = distances(indices(2:k+1))';
end
end
```
这段代码实现了GP算法求解数据集的关联维度,其中使用了k-最近邻算法来计算数据点之间的距离。函数`gp_dim()`接受输入数据X和k值,返回估计的关联维度D和gamma向量。函数`knn_distances()`计算距离到第k个最近邻居的距离矩阵D。