mafft --localpair

mafft --localpair是MAFFT软件中的一个选项，用于进行局部比对。它适用于序列较短且数量较少的情况。具体用法是在命令行中输入"mafft --localpair input_file > output_file"，其中input_file是输入文件的路径，output_file是输出文件的路径。这个选项会使用迭代优化的方法进行局部比对，以提高比对的准确性。\[2\]
#### 引用[.reference_title]
- *1* [使用mafft进行多序列比对](https://blog.csdn.net/weixin_43569478/article/details/108079207)[target="_blank" data-report-click={"spm":"1018.2226.3001.9630","extra":{"utm_source":"vip_chatgpt_common_search_pc_result","utm_medium":"distribute.pc_search_result.none-task-cask-2~all~insert_cask~default-1-null.142^v91^insert_down28v1,239^v3^insert_chatgpt"}} ] [.reference_item]
- *2* [核苷酸pi值计算方法](https://blog.csdn.net/weifanbio/article/details/123222119)[target="_blank" data-report-click={"spm":"1018.2226.3001.9630","extra":{"utm_source":"vip_chatgpt_common_search_pc_result","utm_medium":"distribute.pc_search_result.none-task-cask-2~all~insert_cask~default-1-null.142^v91^insert_down28v1,239^v3^insert_chatgpt"}} ] [.reference_item]
- *3* [生信步骤｜MAFFT结合HMMER进行多序列比对和基于隐马模型的基因搜索](https://blog.csdn.net/m0_64240043/article/details/127934553)[target="_blank" data-report-click={"spm":"1018.2226.3001.9630","extra":{"utm_source":"vip_chatgpt_common_search_pc_result","utm_medium":"distribute.pc_search_result.none-task-cask-2~all~insert_cask~default-1-null.142^v91^insert_down28v1,239^v3^insert_chatgpt"}} ] [.reference_item]
[ .reference_list ]