exposure_dat <- ld_clump_local( + dat = df1, + clump_kb = 500, + clump_r2 = 0.2, + clump_p = 1e-5, + bfile = "D:/R-language/MR代码/课题组数据/g1000_eas", + plink_bin = "D:/R-language/R-4.2.2/library/plinkbinr/bin/plink_Windows.exe" + ) PLINK v1.90b6.10 64-bit (17 Jun 2019) www.cog-genomics.org/plink/1.9/ (C) 2005-2019 Shaun Purcell, Christopher Chang GNU General Public License v3 Logging to C:\Users\86131\AppData\Local\Temp\Rtmp8kX5Lf\file3e5474b5111.log. Options in effect: --bfile D:/R-language/MR����/����������/g1000_eas --clump C:\Users\86131\AppData\Local\Temp\Rtmp8kX5Lf\file3e5474b5111 --clump-kb 500 --clump-p1 1e-05 --clump-r2 0.2 --out C:\Users\86131\AppData\Local\Temp\Rtmp8kX5Lf\file3e5474b5111 14188 MB RAM detected; reserving 7094 MB for main workspace. Allocated 5320 MB successfully, after larger attempt(s) failed. Error: Failed to open D:/R-language/MR����/����������/g1000_eas.bed. Error in file(file, "rt") : cannot open the connection In addition: Warning message: In file(file, "rt") : cannot open file 'C:\Users\86131\AppData\Local\Temp\Rtmp8kX5Lf\file3e5474b5111.clumped': No such file or directory
时间: 2023-10-15 11:07:09 浏览: 550
关于clump与cluster相互转化的数值实现及应用_clump转cluster, pfcball和clump转换
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It seems like there is an error in the code related to file paths. Specifically, the error message says that the program failed to open the file "D:/R-language/MR����/����������/g1000_eas.bed". This could be due to incorrect file path or missing file. Additionally, there is a warning message that says "cannot open file 'C:\Users\86131\AppData\Local\Temp\Rtmp8kX5Lf\file3e5474b5111.clumped': No such file or directory". This could be due to the program not finding the output file at the specified location.
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