怎么解决以下代码的报错 if (\!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install(c("SummarizedExperiment","cqn","Rsamtools", "GenomicAlignments","GenomicRanges","GenomicFeatures", "DESeq2","ggplot2","mclust", "genefilter","BSgenome","BiocParallel", "IRanges","S4Vectors","quantreg", "reshape2","rtracklayer","apeglm","RMariaDB")) if (\!requireNamespace("devtools", quietly = TRUE)) install.packages("devtools") devtools::install_github("ZW-xjtlu/exomePeak2", build_vignettes = TRUE) -bash: syntax error near unexpected token `"BiocManager",' -bash: syntax error near unexpected token `"BiocManager"' -bash: syntax error near unexpected token `c' GenomicAlignments,GenomicRanges,GenomicFeatures,: command not found DESeq2,ggplot2,mclust,: command not found genefilter,BSgenome,BiocParallel,: command not found IRanges,S4Vectors,quantreg,: command not found -bash: syntax error near unexpected token `)' -bash: syntax error near unexpected token `"devtools",' -bash: syntax error near unexpected token `"devtools"' -bash: syntax error near unexpected token `"ZW-xjtlu/exomePeak2",'
时间: 2023-06-12 13:02:55 浏览: 566
matlab人头检测的代码-exomePeak:基于亲和力的shot弹枪测序方法分析RNA转录组测序数据
这个报错是因为你在终端中执行了 R 代码,而终端不支持 R 语法。你需要在 R 环境中执行这些代码。
你可以在 R 环境中打开一个新的 script,将代码复制进去,然后执行。如果你没有安装其中的某些包,R 会提示你安装它们。你可以按照提示进行安装。以下是正确的代码:
```
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install(c("SummarizedExperiment","cqn","Rsamtools", "GenomicAlignments","GenomicRanges","GenomicFeatures", "DESeq2","ggplot2","mclust", "genefilter","BSgenome","BiocParallel", "IRanges","S4Vectors","quantreg", "reshape2","rtracklayer","apeglm","RMariaDB"))
if (!requireNamespace("devtools", quietly = TRUE))
install.packages("devtools")
devtools::install_github("ZW-xjtlu/exomePeak2", build_vignettes = TRUE)
```
注意,这里的代码是 R 语法,不能在终端中执行。你需要在 R 环境中执行这些代码。
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